Taxane_CT less effective in the TP53+ biomarker signature
| signature | var | Other | ARSi | Taxane_CT | PARPi |
|---|---|---|---|---|---|
| all | param | scale = 0.024, shape = 1.3 | scale = 0.024, shape = 1.3 | scale = 0.036, shape = 1.3 | scale = 0.024, shape = 1.3 |
| summary | mean = 39, median = 31.9 | mean = 39, median = 31.9 | mean = 25.7, median = 21 | mean = 39, median = 31.9 | |
| effect | af = 1, hr = 1 | af = 1, hr = 1 | af = 0.66, hr = 1.72 | af = 1, hr = 1 | |
| TP53- | param | scale = 0.024, shape = 1.3 | scale = 0.024, shape = 1.3 | scale = 0.024, shape = 1.3 | scale = 0.024, shape = 1.3 |
| summary | mean = 39, median = 31.9 | mean = 39, median = 31.9 | mean = 39, median = 31.9 | mean = 39, median = 31.9 | |
| effect | af = 1, hr = 1 | af = 1, hr = 1 | af = 1, hr = 1 | af = 1, hr = 1 | |
| TP53+ | param | scale = 0.024, shape = 1.3 | scale = 0.024, shape = 1.3 | scale = 0.049, shape = 1.3 | scale = 0.024, shape = 1.3 |
| summary | mean = 39, median = 31.9 | mean = 39, median = 31.9 | mean = 18.7, median = 15.3 | mean = 39, median = 31.9 | |
| effect | af = 1, hr = 1 | af = 1, hr = 1 | af = 0.48, hr = 2.6 | af = 1, hr = 1 | |
| HRD+ | param | scale = 0.024, shape = 1.3 | scale = 0.024, shape = 1.3 | scale = 0.035, shape = 1.3 | scale = 0.024, shape = 1.3 |
| summary | mean = 39, median = 31.9 | mean = 39, median = 31.9 | mean = 26.1, median = 21.3 | mean = 39, median = 31.9 | |
| effect | af = 1, hr = 1 | af = 1, hr = 1 | af = 0.67, hr = 1.69 | af = 1, hr = 1 | |
| TEfus+ | param | scale = 0.024, shape = 1.3 | scale = 0.024, shape = 1.3 | scale = 0.038, shape = 1.3 | scale = 0.024, shape = 1.3 |
| summary | mean = 39, median = 31.9 | mean = 39, median = 31.9 | mean = 24.2, median = 19.7 | mean = 39, median = 31.9 | |
| effect | af = 1, hr = 1 | af = 1, hr = 1 | af = 0.62, hr = 1.86 | af = 1, hr = 1 |
| subtype | var | Other | ARSi | Taxane_CT | PARPi |
|---|---|---|---|---|---|
| — | param | scale = 0.024, shape = 1.3 | scale = 0.024, shape = 1.3 | scale = 0.024, shape = 1.3 | scale = 0.024, shape = 1.3 |
| summary | mean = 39, median = 31.9 | mean = 39, median = 31.9 | mean = 39, median = 31.9 | mean = 39, median = 31.9 | |
| effect | af = 1, hr = 1 | af = 1, hr = 1 | af = 1, hr = 1 | af = 1, hr = 1 | |
| –+ | param | scale = 0.024, shape = 1.3 | scale = 0.024, shape = 1.3 | scale = 0.024, shape = 1.3 | scale = 0.024, shape = 1.3 |
| summary | mean = 39, median = 31.9 | mean = 39, median = 31.9 | mean = 39, median = 31.9 | mean = 39, median = 31.9 | |
| effect | af = 1, hr = 1 | af = 1, hr = 1 | af = 1, hr = 1 | af = 1, hr = 1 | |
| -+- | param | scale = 0.024, shape = 1.3 | scale = 0.024, shape = 1.3 | scale = 0.049, shape = 1.3 | scale = 0.024, shape = 1.3 |
| summary | mean = 39, median = 31.9 | mean = 39, median = 31.9 | mean = 18.7, median = 15.3 | mean = 39, median = 31.9 | |
| effect | af = 1, hr = 1 | af = 1, hr = 1 | af = 0.48, hr = 2.6 | af = 1, hr = 1 | |
| -++ | param | scale = 0.024, shape = 1.3 | scale = 0.024, shape = 1.3 | scale = 0.049, shape = 1.3 | scale = 0.024, shape = 1.3 |
| summary | mean = 39, median = 31.9 | mean = 39, median = 31.9 | mean = 18.7, median = 15.3 | mean = 39, median = 31.9 | |
| effect | af = 1, hr = 1 | af = 1, hr = 1 | af = 0.48, hr = 2.6 | af = 1, hr = 1 | |
| +– | param | scale = 0.024, shape = 1.3 | scale = 0.024, shape = 1.3 | scale = 0.024, shape = 1.3 | scale = 0.024, shape = 1.3 |
| summary | mean = 39, median = 31.9 | mean = 39, median = 31.9 | mean = 39, median = 31.9 | mean = 39, median = 31.9 | |
| effect | af = 1, hr = 1 | af = 1, hr = 1 | af = 1, hr = 1 | af = 1, hr = 1 | |
| +-+ | param | scale = 0.024, shape = 1.3 | scale = 0.024, shape = 1.3 | scale = 0.024, shape = 1.3 | scale = 0.024, shape = 1.3 |
| summary | mean = 39, median = 31.9 | mean = 39, median = 31.9 | mean = 39, median = 31.9 | mean = 39, median = 31.9 | |
| effect | af = 1, hr = 1 | af = 1, hr = 1 | af = 1, hr = 1 | af = 1, hr = 1 | |
| ++- | param | scale = 0.024, shape = 1.3 | scale = 0.024, shape = 1.3 | scale = 0.049, shape = 1.3 | scale = 0.024, shape = 1.3 |
| summary | mean = 39, median = 31.9 | mean = 39, median = 31.9 | mean = 18.7, median = 15.3 | mean = 39, median = 31.9 | |
| effect | af = 1, hr = 1 | af = 1, hr = 1 | af = 0.48, hr = 2.6 | af = 1, hr = 1 | |
| +++ | param | scale = 0.024, shape = 1.3 | scale = 0.024, shape = 1.3 | scale = 0.049, shape = 1.3 | scale = 0.024, shape = 1.3 |
| summary | mean = 39, median = 31.9 | mean = 39, median = 31.9 | mean = 18.7, median = 15.3 | mean = 39, median = 31.9 | |
| effect | af = 1, hr = 1 | af = 1, hr = 1 | af = 0.48, hr = 2.6 | af = 1, hr = 1 |
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The overall error was 0.87.
The corresponding errors separate for the different treatments were:
ARSi Taxane_CT PARPi
0.690 0.062 0.604
The overall power was .
The corresponding power separate for the different treatments were:
NULL
| signature | var | Control | ARSi | Taxane_CT | PARPi |
|---|---|---|---|---|---|
| all | graduation | 0 | 54 | 0 | 47 |
| futility | 0 | 3 | 171 | 3 | |
| max_n | 0 | 0 | 0 | 0 | |
| n | 690 (556, 764) | 356 (195, 517) | 239 (111, 354) | 368 (223, 526) | |
| n_unique | 690 (556, 764) | 356 (195, 517) | 239 (111, 354) | 368 (223, 526) | |
| time_trial | 60 (60, 60) | 60 (53, 60) | 60 (23, 60) | 60 (60, 60) | |
| time_stop | NA (NA, NA) | 30 (21, 53) | 31 (12, 53) | 40 (22, 55) | |
| post_p | NA (NA, NA) | 0.92 (0.57, 1) | 0.09 (0, 0.61) | 0.94 (0.55, 1) | |
| rate | 0.024 (0.022, 0.026) | 0.021 (0.02, 0.024) | 0.028 (0.024, 0.035) | 0.021 (0.02, 0.024) | |
| TP53- | graduation | 0 | 14 | 31 | 13 |
| futility | 0 | 152 | 163 | 186 | |
| max_n | 0 | 68 | 58 | 76 | |
| n | 386 (323, 430) | 188 (73, 302) | 178 (59, 300) | 182 (69, 302) | |
| n_unique | 386 (323, 430) | 188 (73, 302) | 178 (59, 300) | 182 (69, 302) | |
| time_trial | 60 (60, 60) | 60 (23, 60) | 60 (24, 60) | 60 (21, 60) | |
| time_stop | NA (NA, NA) | 30 (18, 55) | 31 (18, 52) | 30 (18, 49) | |
| post_p | NA (NA, NA) | 0.44 (0.07, 0.86) | 0.46 (0.09, 0.88) | 0.45 (0.08, 0.89) | |
| rate | 0.021 (0.019, 0.023) | 0.022 (0.019, 0.026) | 0.022 (0.019, 0.026) | 0.021 (0.019, 0.026) | |
| TP53+ | graduation | 0 | 301 | 0 | 272 |
| futility | 0 | 3 | 414 | 11 | |
| max_n | 0 | 17 | 0 | 23 | |
| n | 310 (205, 353) | 166 (75, 270) | 52 (45, 72) | 186 (98, 279) | |
| n_unique | 310 (205, 353) | 166 (75, 270) | 52 (45, 72) | 186 (98, 279) | |
| time_trial | 60 (60, 60) | 50 (23, 60) | 29 (18, 60) | 55 (28, 60) | |
| time_stop | NA (NA, NA) | 36 (22, 56) | 26 (17, 43) | 38 (26, 56) | |
| post_p | NA (NA, NA) | 0.99 (0.88, 1) | 0 (0, 0) | 0.99 (0.89, 1) | |
| rate | 0.028 (0.026, 0.032) | 0.021 (0.019, 0.025) | 0.053 (0.047, 0.062) | 0.021 (0.018, 0.024) | |
| HRD+ | graduation | 0 | 57 | 1 | 40 |
| futility | 0 | 16 | 126 | 55 | |
| max_n | 0 | 0 | 0 | 0 | |
| n | 186 (144, 216) | 89 (45, 139) | 63 (26, 103) | 107 (60, 159) | |
| n_unique | 186 (144, 216) | 89 (45, 139) | 63 (26, 103) | 107 (60, 159) | |
| time_trial | 60 (60, 60) | 60 (47, 60) | 60 (41, 60) | 60 (37, 60) | |
| time_stop | NA (NA, NA) | 42 (29, 56) | 43 (33, 55) | 35 (19, 52) | |
| post_p | NA (NA, NA) | 0.78 (0.28, 0.98) | 0.24 (0.02, 0.78) | 0.77 (0.29, 0.98) | |
| rate | 0.024 (0.021, 0.027) | 0.021 (0.017, 0.026) | 0.028 (0.021, 0.038) | 0.022 (0.019, 0.026) | |
| TEfus+ | graduation | 0 | 72 | 0 | 61 |
| futility | 0 | 23 | 230 | 32 | |
| max_n | 0 | 0 | 0 | 0 | |
| n | 246 (184, 286) | 126 (64, 198) | 72 (42, 125) | 141 (75, 201) | |
| n_unique | 246 (184, 286) | 126 (64, 198) | 72 (42, 125) | 141 (75, 201) | |
| time_trial | 60 (60, 60) | 60 (37, 60) | 60 (26, 60) | 60 (39, 60) | |
| time_stop | NA (NA, NA) | 37 (23, 54) | 32 (23, 52) | 38 (24, 55) | |
| post_p | NA (NA, NA) | 0.86 (0.37, 0.99) | 0.13 (0, 0.66) | 0.87 (0.43, 0.99) | |
| rate | 0.025 (0.022, 0.028) | 0.022 (0.018, 0.025) | 0.031 (0.025, 0.04) | 0.021 (0.018, 0.025) |
| subtype | var | Control | ARSi | Taxane_CT | PARPi |
|---|---|---|---|---|---|
| — | graduation | 0 | 203 | 222 | 237 |
| futility | 0 | 0 | 0 | 0 | |
| max_n | 0 | 67 | 58 | 73 | |
| n | 216 (175, 247) | 93 (34, 195) | 90 (27, 192) | 90 (21, 191) | |
| n_unique | 216 (175, 247) | 93 (34, 195) | 90 (27, 192) | 90 (21, 191) | |
| post_p | NA (NA, NA) | 0.42 (0.09, 0.84) | 0.44 (0.09, 0.87) | 0.47 (0.09, 0.88) | |
| rate | 0.021 (0.018, 0.024) | 0.022 (0.019, 0.029) | 0.022 (0.018, 0.027) | 0.022 (0.018, 0.029) | |
| –+ | graduation | 0 | 256 | 322 | 285 |
| futility | 0 | 0 | 0 | 0 | |
| max_n | 0 | 66 | 57 | 71 | |
| n | 60 (43, 74) | 26 (11, 57) | 22 (10, 59) | 25 (8, 57) | |
| n_unique | 60 (43, 74) | 26 (11, 57) | 22 (10, 59) | 25 (8, 57) | |
| post_p | NA (NA, NA) | 0.45 (0.11, 0.83) | 0.45 (0.11, 0.84) | 0.48 (0.12, 0.85) | |
| rate | 0.021 (0.016, 0.026) | 0.023 (0.016, 0.034) | 0.023 (0.016, 0.034) | 0.022 (0.016, 0.034) | |
| -+- | graduation | 0 | 321 | 470 | 294 |
| futility | 0 | 0 | 0 | 0 | |
| max_n | 0 | 17 | 0 | 23 | |
| n | 136 (84, 157) | 72 (30, 133) | 21 (14, 30) | 76 (33, 127) | |
| n_unique | 136 (84, 157) | 72 (30, 133) | 21 (14, 30) | 76 (33, 127) | |
| post_p | NA (NA, NA) | 0.94 (0.58, 1) | 0.01 (0, 0.1) | 0.95 (0.58, 1) | |
| rate | 0.029 (0.025, 0.033) | 0.021 (0.018, 0.027) | 0.054 (0.044, 0.072) | 0.021 (0.017, 0.026) | |
| -++ | graduation | 0 | 358 | 479 | 331 |
| futility | 0 | 0 | 0 | 0 | |
| max_n | 0 | 17 | 0 | 23 | |
| n | 96 (56, 119) | 48 (20, 88) | 17 (11, 25) | 55 (22, 96) | |
| n_unique | 96 (56, 119) | 48 (20, 88) | 17 (11, 25) | 55 (22, 96) | |
| post_p | NA (NA, NA) | 0.9 (0.52, 0.99) | 0.02 (0, 0.13) | 0.9 (0.52, 1) | |
| rate | 0.029 (0.024, 0.034) | 0.022 (0.017, 0.028) | 0.054 (0.043, 0.074) | 0.021 (0.017, 0.027) | |
| +– | graduation | 0 | 255 | 277 | 271 |
| futility | 0 | 0 | 0 | 0 | |
| max_n | 0 | 66 | 56 | 70 | |
| n | 56 (39, 70) | 22 (8, 50) | 22 (6, 48) | 24 (12, 52) | |
| n_unique | 56 (39, 70) | 22 (8, 50) | 22 (6, 48) | 24 (12, 52) | |
| post_p | NA (NA, NA) | 0.5 (0.15, 0.85) | 0.45 (0.14, 0.85) | 0.46 (0.12, 0.82) | |
| rate | 0.021 (0.016, 0.027) | 0.022 (0.015, 0.034) | 0.022 (0.015, 0.036) | 0.023 (0.017, 0.032) | |
| +-+ | graduation | 0 | 301 | 357 | 311 |
| futility | 0 | 0 | 0 | 0 | |
| max_n | 0 | 65 | 55 | 68 | |
| n | 53 (35, 66) | 22 (7, 46) | 18 (5, 48) | 25 (12, 51) | |
| n_unique | 53 (35, 66) | 22 (7, 46) | 18 (5, 48) | 25 (12, 51) | |
| post_p | NA (NA, NA) | 0.48 (0.13, 0.86) | 0.5 (0.14, 0.86) | 0.49 (0.12, 0.87) | |
| rate | 0.021 (0.016, 0.027) | 0.022 (0.015, 0.035) | 0.022 (0.015, 0.035) | 0.023 (0.016, 0.032) | |
| ++- | graduation | 0 | 343 | 478 | 339 |
| futility | 0 | 0 | 0 | 0 | |
| max_n | 0 | 17 | 0 | 23 | |
| n | 39 (24, 51) | 17 (6, 38) | 7 (3, 14) | 25 (12, 44) | |
| n_unique | 39 (24, 51) | 17 (6, 38) | 7 (3, 14) | 25 (12, 44) | |
| post_p | NA (NA, NA) | 0.78 (0.36, 0.97) | 0.13 (0.02, 0.39) | 0.81 (0.4, 0.98) | |
| rate | 0.029 (0.022, 0.038) | 0.021 (0.013, 0.033) | 0.056 (0.036, 0.1) | 0.021 (0.015, 0.03) | |
| +++ | graduation | 0 | 375 | 484 | 365 |
| futility | 0 | 0 | 0 | 0 | |
| max_n | 0 | 17 | 0 | 23 | |
| n | 37 (22, 51) | 18 (6, 39) | 7 (3, 14) | 22 (10, 43) | |
| n_unique | 37 (22, 51) | 18 (6, 39) | 7 (3, 14) | 22 (10, 43) | |
| post_p | NA (NA, NA) | 0.79 (0.36, 0.98) | 0.13 (0.03, 0.41) | 0.78 (0.36, 0.98) | |
| rate | 0.029 (0.022, 0.038) | 0.022 (0.014, 0.033) | 0.054 (0.036, 0.09) | 0.022 (0.016, 0.032) |
Posterior probabilities
Randomization probabilities
PFS rates
Posterior probabilities
Randomization probabilities
PFS rates
| signature | var | ARSi | Taxane_CT | PARPi |
|---|---|---|---|---|
| all | count | 54 | 47 | |
| time_stop | 30 (22, 54) | 40 (25, 55) | ||
| n_trt | 226 (156, 386) | 291 (160, 433) | ||
| n_control | 342 (230, 586) | 454 (269, 647) | ||
| post_p | 0.99 (0.96, 1) | 1 (0.97, 1) | ||
| order | 2 (1, 4) | 3 (1, 4) | ||
| TP53- | count | 14 | 31 | 13 |
| time_stop | 42 (25, 51) | 35 (22, 52) | 42 (31, 53) | |
| n_trt | 140 (94, 207) | 165 (80, 238) | 174 (136, 220) | |
| n_control | 252 (146, 340) | 227 (123, 310) | 273 (191, 310) | |
| post_p | 0.97 (0.91, 0.98) | 0.98 (0.93, 1) | 0.98 (0.95, 1) | |
| order | 3 (1.3, 5) | 1 (1, 3) | 3 (1, 5.8) | |
| TP53+ | count | 301 | 272 | |
| time_stop | 36 (22, 56) | 39 (27, 56) | ||
| n_trt | 134 (70, 217) | 150 (93, 239) | ||
| n_control | 189 (105, 301) | 202 (129, 310) | ||
| post_p | 0.99 (0.94, 1) | 0.99 (0.96, 1) | ||
| order | 1 (1, 3) | 2 (1, 3) | ||
| HRD+ | count | 57 | 1 | 40 |
| time_stop | 42 (30, 57) | 25 (25, 25) | 46 (34, 55) | |
| n_trt | 86 (54, 117) | 50 (50, 50) | 103 (74, 148) | |
| n_control | 132 (87, 186) | 64 (64, 64) | 137 (103, 185) | |
| post_p | 0.98 (0.94, 1) | 1 (1, 1) | 0.99 (0.93, 1) | |
| order | 2 (1, 4) | 2 (2, 2) | 2.5 (1, 4.1) | |
| TEfus+ | count | 72 | 61 | |
| time_stop | 37 (24, 55) | 41 (30, 55) | ||
| n_trt | 96 (62, 162) | 114 (74, 175) | ||
| n_control | 150 (94, 234) | 174 (115, 231) | ||
| post_p | 0.98 (0.94, 1) | 0.99 (0.97, 1) | ||
| order | 2 (1, 4) | 2 (1, 4) |
| signature | var | ARSi | Taxane_CT | PARPi |
|---|---|---|---|---|
| all | count | 3 | 171 | 3 |
| time_stop | 15 (13, 23) | 31 (12, 53) | 22 (21, 25) | |
| n_trt | 86 (62, 109) | 146 (81, 252) | 131 (125, 156) | |
| n_control | 152 (125, 253) | 354 (134, 615) | 219 (203, 251) | |
| post_p | 0.09 (0.05, 0.1) | 0.01 (0, 0.1) | 0.07 (0.03, 0.12) | |
| order | 1 (1, 2.6) | 3 (1, 5) | 3 (2.2, 3.8) | |
| TP53- | count | 152 | 163 | 186 |
| time_stop | 30 (17, 55) | 31 (17, 52) | 30 (17, 48) | |
| n_trt | 90 (55, 238) | 96 (52, 202) | 98 (53, 192) | |
| n_control | 177 (94, 360) | 185 (95, 341) | 177 (94, 322) | |
| post_p | 0.15 (0.03, 0.26) | 0.15 (0.04, 0.26) | 0.16 (0.05, 0.27) | |
| order | 2 (1, 5) | 3 (1, 5) | 2 (1, 4) | |
| TP53+ | count | 3 | 414 | 11 |
| time_stop | 22 (20, 24) | 26 (17, 43) | 21 (18, 41) | |
| n_trt | 53 (53, 62) | 54 (50, 74) | 55 (50, 100) | |
| n_control | 121 (89, 124) | 128 (80, 242) | 103 (84, 208) | |
| post_p | 0.22 (0.22, 0.23) | 0.01 (0, 0.11) | 0.15 (0.11, 0.26) | |
| order | 2 (1.2, 3.6) | 1 (1, 3) | 2 (1, 4) | |
| HRD+ | count | 16 | 126 | 55 |
| time_stop | 38 (30, 51) | 43 (33, 55) | 27 (17, 43) | |
| n_trt | 56 (50, 90) | 62 (50, 86) | 59 (50, 93) | |
| n_control | 114 (84, 174) | 135 (102, 183) | 80 (45, 145) | |
| post_p | 0.1 (0.04, 0.2) | 0.08 (0.01, 0.24) | 0.17 (0.07, 0.27) | |
| order | 3 (2, 5) | 4 (2, 6) | 2 (1, 4) | |
| TEfus+ | count | 23 | 230 | 32 |
| time_stop | 36 (21, 46) | 32 (23, 52) | 26 (20, 43) | |
| n_trt | 64 (51, 112) | 62 (51, 92) | 70 (51, 109) | |
| n_control | 139 (86, 213) | 133 (83, 219) | 112 (78, 186) | |
| post_p | 0.13 (0.03, 0.22) | 0.04 (0, 0.2) | 0.16 (0.08, 0.25) | |
| order | 3 (1, 4) | 2 (1, 5) | 2 (1.1, 4.9) |
| signature | treatment | var | — | –+ | -+- | -++ | +– | +-+ | ++- | +++ |
|---|---|---|---|---|---|---|---|---|---|---|
| all | ARSi | count | 54 | 54 | 54 | 54 | 54 | 54 | 54 | 54 |
| time | 30 (22, 54) | 30 (22, 54) | 30 (22, 54) | 30 (22, 54) | 30 (22, 54) | 30 (22, 54) | 30 (22, 54) | 30 (22, 54) | ||
| n | 76 (36, 140) | 20 (11, 36) | 46 (21, 79) | 31 (17, 64) | 15 (8, 30) | 14 (6, 29) | 10 (5, 20) | 10 (6, 22) | ||
| post_p | 0.74 (0.58, 0.93) | 0.66 (0.57, 0.87) | 0.87 (0.66, 0.99) | 0.83 (0.62, 0.97) | 0.65 (0.57, 0.83) | 0.63 (0.56, 0.76) | 0.64 (0.57, 0.88) | 0.65 (0.56, 0.88) | ||
| r_prob | 0.37 (0.37, 0.37) | 0.19 (0.19, 0.19) | 0.18 (0.18, 0.18) | 0.12 (0.12, 0.12) | 0 (0, 0) | 0 (0, 0) | 0 (0, 0) | 0 (0, 0) | ||
| rate | 0.016 (0.011, 0.02) | 0.013 (0.008, 0.019) | 0.017 (0.012, 0.023) | 0.017 (0.009, 0.025) | 0.013 (0, 0.018) | 0.014 (0, 0.019) | 0.018 (0, 0.028) | 0.015 (0, 0.026) | ||
| PARPi | count | 47 | 47 | 47 | 47 | 47 | 47 | 47 | 47 | |
| time | 40 (25, 55) | 40 (25, 55) | 40 (25, 55) | 40 (25, 55) | 40 (25, 55) | 40 (25, 55) | 40 (25, 55) | 40 (25, 55) | ||
| n | 78 (23, 146) | 23 (11, 46) | 53 (20, 90) | 38 (17, 63) | 28 (15, 47) | 27 (18, 41) | 19 (11, 33) | 19 (11, 36) | ||
| post_p | 0.65 (0.56, 0.87) | 0.68 (0.56, 0.9) | 0.88 (0.62, 0.98) | 0.84 (0.61, 0.98) | 0.66 (0.57, 0.88) | 0.69 (0.57, 0.86) | 0.72 (0.57, 0.94) | 0.82 (0.6, 0.95) | ||
| r_prob | 0 (0, 0) | 0.06 (0.06, 0.06) | 0 (0, 0) | 0.06 (0.06, 0.06) | 0.5 (0.5, 0.5) | 0.5 (0.5, 0.5) | 0.5 (0.5, 0.5) | 0.5 (0.5, 0.5) | ||
| rate | 0.016 (0.013, 0.02) | 0.014 (0.006, 0.02) | 0.019 (0.01, 0.025) | 0.019 (0.014, 0.026) | 0.017 (0.005, 0.023) | 0.017 (0.008, 0.021) | 0.02 (0.009, 0.028) | 0.016 (0.011, 0.027) | ||
| TP53- | ARSi | count | 14 | 14 | 14 | 14 | ||||
| time | 42 (25, 51) | 42 (25, 51) | 42 (25, 51) | 42 (25, 51) | ||||||
| n | 91 (56, 121) | 22 (15, 40) | 12 (6, 29) | 12 (6, 29) | ||||||
| post_p | 0.76 (0.71, 0.88) | 0.75 (0.71, 0.93) | 0.72 (0.63, 0.86) | 0.75 (0.63, 0.86) | ||||||
| r_prob | 0.37 (0.37, 0.37) | 0.19 (0.19, 0.19) | 0 (0, 0) | 0 (0, 0) | ||||||
| rate | 0.016 (0.011, 0.019) | 0.013 (0.008, 0.017) | 0.012 (0, 0.017) | 0.009 (0, 0.017) | ||||||
| Taxane_CT | count | 31 | 31 | 31 | 31 | |||||
| time | 35 (22, 52) | 35 (22, 52) | 35 (22, 52) | 35 (22, 52) | ||||||
| n | 92 (43, 147) | 26 (15, 48) | 20 (9, 38) | 22 (8, 40) | ||||||
| post_p | 0.8 (0.72, 0.96) | 0.77 (0.71, 0.94) | 0.76 (0.65, 0.91) | 0.75 (0.62, 0.87) | ||||||
| r_prob | 0.25 (0.25, 0.25) | 0.38 (0.38, 0.38) | 0 (0, 0) | 0 (0, 0) | ||||||
| rate | 0.015 (0.009, 0.019) | 0.012 (0, 0.022) | 0.01 (0, 0.018) | 0.012 (0, 0.017) | ||||||
| PARPi | count | 13 | 13 | 13 | 13 | |||||
| time | 42 (31, 53) | 42 (31, 53) | 42 (31, 53) | 42 (31, 53) | ||||||
| n | 89 (52, 139) | 25 (13, 51) | 28 (14, 41) | 27 (20, 35) | ||||||
| post_p | 0.82 (0.7, 0.95) | 0.77 (0.71, 0.86) | 0.73 (0.71, 0.86) | 0.83 (0.71, 0.93) | ||||||
| r_prob | 0 (0, 0) | 0.06 (0.06, 0.06) | 0.5 (0.5, 0.5) | 0.5 (0.5, 0.5) | ||||||
| rate | 0.016 (0.013, 0.02) | 0.014 (0.011, 0.017) | 0.015 (0.009, 0.021) | 0.014 (0.01, 0.018) | ||||||
| TP53+ | ARSi | count | 301 | 301 | 301 | 301 | ||||
| time | 36 (22, 56) | 36 (22, 56) | 36 (22, 56) | 36 (22, 56) | ||||||
| n | 59 (30, 103) | 39 (20, 78) | 14 (6, 31) | 14 (6, 31) | ||||||
| post_p | 0.88 (0.73, 0.99) | 0.82 (0.72, 0.98) | 0.74 (0.61, 0.94) | 0.74 (0.62, 0.94) | ||||||
| r_prob | 0.18 (0.18, 0.18) | 0.12 (0.12, 0.12) | 0 (0, 0) | 0 (0, 0) | ||||||
| rate | 0.018 (0.011, 0.023) | 0.018 (0.009, 0.023) | 0.014 (0, 0.023) | 0.015 (0, 0.024) | ||||||
| PARPi | count | 272 | 272 | 272 | 272 | |||||
| time | 39 (27, 56) | 39 (27, 56) | 39 (27, 56) | 39 (27, 56) | ||||||
| n | 60 (30, 110) | 44 (23, 79) | 21 (12, 39) | 20 (10, 37) | ||||||
| post_p | 0.9 (0.74, 0.99) | 0.88 (0.72, 0.98) | 0.78 (0.71, 0.94) | 0.76 (0.7, 0.95) | ||||||
| r_prob | 0 (0, 0) | 0.06 (0.06, 0.06) | 0.5 (0.5, 0.5) | 0.5 (0.5, 0.5) | ||||||
| rate | 0.018 (0.011, 0.023) | 0.017 (0.01, 0.022) | 0.017 (0.009, 0.023) | 0.017 (0.009, 0.024) | ||||||
| HRD+ | ARSi | count | 57 | 57 | 57 | 57 | ||||
| time | 42 (30, 57) | 42 (30, 57) | 42 (30, 57) | 42 (30, 57) | ||||||
| n | 23 (15, 36) | 25 (15, 38) | 16 (8, 30) | 17 (8, 29) | ||||||
| post_p | 0.79 (0.71, 0.92) | 0.78 (0.71, 0.91) | 0.8 (0.69, 0.95) | 0.82 (0.71, 0.93) | ||||||
| r_prob | 0 (0, 0) | 0 (0, 0) | 0 (0, 0) | 0 (0, 0) | ||||||
| rate | 0.013 (0.005, 0.018) | 0.013 (0.005, 0.017) | 0.014 (0.006, 0.021) | 0.016 (0.006, 0.023) | ||||||
| Taxane_CT | count | 1 | 1 | 1 | 1 | |||||
| time | 25 (25, 25) | 25 (25, 25) | 25 (25, 25) | 25 (25, 25) | ||||||
| n | 14 (14, 14) | 16 (16, 16) | 7 (7, 7) | 13 (13, 13) | ||||||
| post_p | 0.84 (0.84, 0.84) | 0.72 (0.72, 0.72) | 0.62 (0.62, 0.62) | 0.82 (0.82, 0.82) | ||||||
| r_prob | 0 (0, 0) | 0 (0, 0) | 0 (0, 0) | 0 (0, 0) | ||||||
| rate | 0.009 (0.009, 0.009) | 0 (0, 0) | 0.018 (0.018, 0.018) | 0.008 (0.008, 0.008) | ||||||
| PARPi | count | 40 | 40 | 40 | 40 | |||||
| time | 46 (34, 55) | 46 (34, 55) | 46 (34, 55) | 46 (34, 55) | ||||||
| n | 30 (15, 53) | 30 (19, 48) | 21 (12, 33) | 22 (10, 38) | ||||||
| post_p | 0.78 (0.71, 0.9) | 0.75 (0.71, 0.89) | 0.83 (0.73, 0.98) | 0.85 (0.71, 0.97) | ||||||
| r_prob | 0.5 (0.5, 0.5) | 0.5 (0.5, 0.5) | 0.5 (0.5, 0.5) | 0.5 (0.5, 0.5) | ||||||
| rate | 0.016 (0.009, 0.02) | 0.016 (0.009, 0.02) | 0.019 (0.014, 0.024) | 0.018 (0.009, 0.026) | ||||||
| TEfus+ | ARSi | count | 72 | 72 | 72 | 72 | ||||
| time | 37 (24, 55) | 37 (24, 55) | 37 (24, 55) | 37 (24, 55) | ||||||
| n | 28 (16, 48) | 35 (18, 67) | 18 (9, 32) | 13 (6, 24) | ||||||
| post_p | 0.77 (0.71, 0.89) | 0.88 (0.72, 0.97) | 0.74 (0.67, 0.9) | 0.77 (0.66, 0.95) | ||||||
| r_prob | 0.19 (0.19, 0.19) | 0.12 (0.12, 0.12) | 0 (0, 0) | 0 (0, 0) | ||||||
| rate | 0.014 (0.004, 0.018) | 0.018 (0.011, 0.023) | 0.011 (0.005, 0.019) | 0.013 (0, 0.022) | ||||||
| PARPi | count | 61 | 61 | 61 | 61 | |||||
| time | 41 (30, 55) | 41 (30, 55) | 41 (30, 55) | 41 (30, 55) | ||||||
| n | 27 (13, 47) | 43 (23, 65) | 27 (16, 50) | 20 (11, 38) | ||||||
| post_p | 0.74 (0.71, 0.89) | 0.89 (0.74, 0.99) | 0.77 (0.7, 0.91) | 0.81 (0.71, 0.96) | ||||||
| r_prob | 0.06 (0.06, 0.06) | 0.06 (0.06, 0.06) | 0.5 (0.5, 0.5) | 0.5 (0.5, 0.5) | ||||||
| rate | 0.013 (0.008, 0.019) | 0.017 (0.011, 0.024) | 0.015 (0.009, 0.019) | 0.016 (0.01, 0.024) |
| signature | treatment | var | — | –+ | -+- | -++ | +– | +-+ | ++- | +++ |
|---|---|---|---|---|---|---|---|---|---|---|
| all | ARSi | count | 3 | 3 | 3 | 3 | 3 | 3 | 3 | 3 |
| time | 15 (13, 23) | 15 (13, 23) | 15 (13, 23) | 15 (13, 23) | 15 (13, 23) | 15 (13, 23) | 15 (13, 23) | 15 (13, 23) | ||
| n | 33 (24, 34) | 8 (6, 8) | 24 (14, 26) | 3 (3, 17) | 5 (5, 6) | 4 (3, 6) | 3 (1, 6) | 5 (3, 9) | ||
| post_p | 0.28 (0.26, 0.29) | 0.37 (0.34, 0.38) | 0.45 (0.4, 0.47) | 0.3 (0.26, 0.46) | 0.45 (0.4, 0.46) | 0.45 (0.38, 0.49) | 0.44 (0.41, 0.47) | 0.46 (0.46, 0.49) | ||
| r_prob | 0.37 (0.37, 0.37) | 0.19 (0.19, 0.19) | 0.18 (0.18, 0.18) | 0.12 (0.12, 0.12) | 0 (0, 0) | 0 (0, 0) | 0 (0, 0) | 0 (0, 0) | ||
| rate | 0.026 (0.023, 0.032) | 0.038 (0.03, 0.042) | 0.025 (0.021, 0.036) | 0.025 (0.005, 0.078) | 0.034 (0.026, 0.051) | 0.031 (0.006, 0.046) | 0.032 (0.006, 0.154) | 0.046 (0.025, 0.142) | ||
| Taxane_CT | count | 171 | 171 | 171 | 171 | 171 | 171 | 171 | 171 | |
| time | 31 (12, 53) | 31 (12, 53) | 31 (12, 53) | 31 (12, 53) | 31 (12, 53) | 31 (12, 53) | 31 (12, 53) | 31 (12, 53) | ||
| n | 43 (20, 118) | 15 (8, 30) | 20 (13, 29) | 17 (11, 26) | 12 (3, 32) | 10 (3, 28) | 6 (2, 12) | 6 (2, 12) | ||
| post_p | 0.33 (0.11, 0.48) | 0.35 (0.13, 0.48) | 0.04 (0, 0.33) | 0.09 (0, 0.41) | 0.42 (0.23, 0.49) | 0.41 (0.22, 0.49) | 0.31 (0.08, 0.47) | 0.26 (0.07, 0.47) | ||
| r_prob | 0.25 (0.25, 0.25) | 0.38 (0.38, 0.38) | 0.41 (0.41, 0.41) | 0.41 (0.41, 0.41) | 0 (0, 0) | 0 (0, 0) | 0 (0, 0) | 0 (0, 0) | ||
| rate | 0.022 (0.017, 0.031) | 0.024 (0.013, 0.037) | 0.051 (0.034, 0.068) | 0.049 (0.033, 0.066) | 0.024 (0.014, 0.049) | 0.023 (0.013, 0.049) | 0.053 (0.028, 0.119) | 0.053 (0.028, 0.099) | ||
| PARPi | count | 3 | 3 | 3 | 3 | 3 | 3 | 3 | 3 | |
| time | 22 (21, 25) | 22 (21, 25) | 22 (21, 25) | 22 (21, 25) | 22 (21, 25) | 22 (21, 25) | 22 (21, 25) | 22 (21, 25) | ||
| n | 33 (12, 51) | 11 (8, 21) | 24 (23, 27) | 11 (6, 25) | 14 (13, 15) | 14 (12, 16) | 11 (8, 13) | 14 (12, 19) | ||
| post_p | 0.19 (0.19, 0.42) | 0.43 (0.37, 0.48) | 0.4 (0.28, 0.44) | 0.31 (0.16, 0.35) | 0.39 (0.33, 0.45) | 0.41 (0.32, 0.43) | 0.37 (0.36, 0.41) | 0.39 (0.31, 0.47) | ||
| r_prob | 0 (0, 0) | 0.06 (0.06, 0.06) | 0 (0, 0) | 0.06 (0.06, 0.06) | 0.5 (0.5, 0.5) | 0.5 (0.5, 0.5) | 0.5 (0.5, 0.5) | 0.5 (0.5, 0.5) | ||
| rate | 0.023 (0.022, 0.042) | 0.019 (0.019, 0.032) | 0.031 (0.029, 0.031) | 0.057 (0.041, 0.058) | 0.022 (0.022, 0.024) | 0.023 (0.02, 0.027) | 0.037 (0.025, 0.038) | 0.03 (0.024, 0.031) | ||
| TP53- | ARSi | count | 152 | 152 | 152 | 152 | ||||
| time | 30 (17, 55) | 30 (17, 55) | 30 (17, 55) | 30 (17, 55) | ||||||
| n | 46 (27, 135) | 14 (8, 36) | 12 (5, 35) | 13 (5, 35) | ||||||
| post_p | 0.3 (0.09, 0.46) | 0.38 (0.09, 0.48) | 0.42 (0.16, 0.49) | 0.42 (0.22, 0.49) | ||||||
| r_prob | 0.37 (0.37, 0.37) | 0.19 (0.19, 0.19) | 0 (0, 0) | 0 (0, 0) | ||||||
| rate | 0.021 (0.017, 0.03) | 0.025 (0.017, 0.045) | 0.024 (0.016, 0.04) | 0.024 (0.017, 0.051) | ||||||
| Taxane_CT | count | 163 | 163 | 163 | 163 | |||||
| time | 31 (17, 52) | 31 (17, 52) | 31 (17, 52) | 31 (17, 52) | ||||||
| n | 47 (25, 127) | 17 (10, 30) | 13 (5, 32) | 11 (5, 30) | ||||||
| post_p | 0.34 (0.1, 0.48) | 0.36 (0.13, 0.47) | 0.41 (0.24, 0.49) | 0.41 (0.22, 0.49) | ||||||
| r_prob | 0.25 (0.25, 0.25) | 0.38 (0.38, 0.38) | 0 (0, 0) | 0 (0, 0) | ||||||
| rate | 0.021 (0.016, 0.028) | 0.024 (0.016, 0.036) | 0.024 (0.015, 0.048) | 0.024 (0.016, 0.046) | ||||||
| PARPi | count | 186 | 186 | 186 | 186 | |||||
| time | 30 (17, 48) | 30 (17, 48) | 30 (17, 48) | 30 (17, 48) | ||||||
| n | 42 (16, 114) | 15 (6, 32) | 16 (9, 36) | 16 (10, 29) | ||||||
| post_p | 0.35 (0.12, 0.48) | 0.41 (0.2, 0.49) | 0.38 (0.14, 0.48) | 0.37 (0.15, 0.48) | ||||||
| r_prob | 0 (0, 0) | 0.06 (0.06, 0.06) | 0.5 (0.5, 0.5) | 0.5 (0.5, 0.5) | ||||||
| rate | 0.021 (0.016, 0.031) | 0.024 (0.016, 0.042) | 0.023 (0.014, 0.034) | 0.023 (0.015, 0.035) | ||||||
| TP53+ | ARSi | count | 3 | 3 | 3 | 3 | ||||
| time | 22 (20, 24) | 22 (20, 24) | 22 (20, 24) | 22 (20, 24) | ||||||
| n | 27 (25, 30) | 11 (10, 18) | 7 (5, 8) | 9 (8, 10) | ||||||
| post_p | 0.36 (0.29, 0.45) | 0.48 (0.29, 0.48) | 0.41 (0.38, 0.43) | 0.46 (0.44, 0.49) | ||||||
| r_prob | 0.18 (0.18, 0.18) | 0.12 (0.12, 0.12) | 0 (0, 0) | 0 (0, 0) | ||||||
| rate | 0.025 (0.022, 0.03) | 0.022 (0.022, 0.025) | 0.032 (0.024, 0.068) | 0.023 (0.021, 0.035) | ||||||
| Taxane_CT | count | 414 | 414 | 414 | 414 | |||||
| time | 26 (17, 43) | 26 (17, 43) | 26 (17, 43) | 26 (17, 43) | ||||||
| n | 22 (15, 32) | 18 (12, 26) | 7 (4, 15) | 7 (4, 15) | ||||||
| post_p | 0.07 (0, 0.35) | 0.1 (0.01, 0.39) | 0.4 (0.11, 0.48) | 0.41 (0.13, 0.49) | ||||||
| r_prob | 0.41 (0.41, 0.41) | 0.41 (0.41, 0.41) | 0 (0, 0) | 0 (0, 0) | ||||||
| rate | 0.047 (0.03, 0.065) | 0.046 (0.03, 0.067) | 0.044 (0.025, 0.093) | 0.043 (0.024, 0.086) | ||||||
| PARPi | count | 11 | 11 | 11 | 11 | |||||
| time | 21 (18, 41) | 21 (18, 41) | 21 (18, 41) | 21 (18, 41) | ||||||
| n | 24 (13, 40) | 14 (7, 28) | 13 (7, 20) | 12 (6, 17) | ||||||
| post_p | 0.34 (0.09, 0.45) | 0.38 (0.14, 0.48) | 0.39 (0.33, 0.48) | 0.46 (0.32, 0.49) | ||||||
| r_prob | 0 (0, 0) | 0.06 (0.06, 0.06) | 0.5 (0.5, 0.5) | 0.5 (0.5, 0.5) | ||||||
| rate | 0.031 (0.02, 0.047) | 0.03 (0.021, 0.058) | 0.026 (0.019, 0.043) | 0.028 (0.019, 0.037) | ||||||
| HRD+ | ARSi | count | 16 | 16 | 16 | 16 | ||||
| time | 38 (30, 51) | 38 (30, 51) | 38 (30, 51) | 38 (30, 51) | ||||||
| n | 15 (8, 28) | 16 (8, 33) | 10 (4, 21) | 16 (4, 30) | ||||||
| post_p | 0.31 (0.11, 0.48) | 0.32 (0.17, 0.49) | 0.4 (0.16, 0.46) | 0.41 (0.32, 0.48) | ||||||
| r_prob | 0 (0, 0) | 0 (0, 0) | 0 (0, 0) | 0 (0, 0) | ||||||
| rate | 0.031 (0.016, 0.037) | 0.023 (0.021, 0.03) | 0.034 (0.024, 0.049) | 0.03 (0.023, 0.048) | ||||||
| Taxane_CT | count | 126 | 126 | 126 | 126 | |||||
| time | 43 (33, 55) | 43 (33, 55) | 43 (33, 55) | 43 (33, 55) | ||||||
| n | 23 (11, 43) | 20 (9, 38) | 8 (4, 18) | 8 (4, 15) | ||||||
| post_p | 0.39 (0.14, 0.49) | 0.4 (0.14, 0.49) | 0.17 (0.04, 0.42) | 0.16 (0.03, 0.41) | ||||||
| r_prob | 0 (0, 0) | 0 (0, 0) | 0 (0, 0) | 0 (0, 0) | ||||||
| rate | 0.022 (0.017, 0.036) | 0.023 (0.017, 0.036) | 0.051 (0.033, 0.083) | 0.049 (0.033, 0.086) | ||||||
| PARPi | count | 55 | 55 | 55 | 55 | |||||
| time | 27 (17, 43) | 27 (17, 43) | 27 (17, 43) | 27 (17, 43) | ||||||
| n | 15 (9, 26) | 16 (10, 26) | 15 (9, 24) | 14 (7, 22) | ||||||
| post_p | 0.39 (0.18, 0.48) | 0.4 (0.16, 0.47) | 0.41 (0.2, 0.49) | 0.41 (0.22, 0.49) | ||||||
| r_prob | 0.5 (0.5, 0.5) | 0.5 (0.5, 0.5) | 0.5 (0.5, 0.5) | 0.5 (0.5, 0.5) | ||||||
| rate | 0.022 (0.013, 0.036) | 0.023 (0.012, 0.036) | 0.025 (0.015, 0.041) | 0.03 (0.018, 0.039) | ||||||
| TEfus+ | ARSi | count | 23 | 23 | 23 | 23 | ||||
| time | 36 (21, 46) | 36 (21, 46) | 36 (21, 46) | 36 (21, 46) | ||||||
| n | 13 (9, 32) | 27 (16, 55) | 13 (8, 28) | 9 (4, 23) | ||||||
| post_p | 0.35 (0.1, 0.46) | 0.4 (0.19, 0.48) | 0.35 (0.19, 0.48) | 0.37 (0.15, 0.48) | ||||||
| r_prob | 0.19 (0.19, 0.19) | 0.12 (0.12, 0.12) | 0 (0, 0) | 0 (0, 0) | ||||||
| rate | 0.025 (0.02, 0.037) | 0.027 (0.02, 0.04) | 0.026 (0.019, 0.034) | 0.038 (0.023, 0.088) | ||||||
| Taxane_CT | count | 230 | 230 | 230 | 230 | |||||
| time | 32 (23, 52) | 32 (23, 52) | 32 (23, 52) | 32 (23, 52) | ||||||
| n | 20 (12, 36) | 18 (12, 26) | 16 (7, 33) | 7 (4, 14) | ||||||
| post_p | 0.38 (0.16, 0.49) | 0.04 (0, 0.26) | 0.43 (0.22, 0.49) | 0.28 (0.09, 0.47) | ||||||
| r_prob | 0.38 (0.38, 0.38) | 0.41 (0.41, 0.41) | 0 (0, 0) | 0 (0, 0) | ||||||
| rate | 0.022 (0.016, 0.032) | 0.05 (0.036, 0.072) | 0.023 (0.016, 0.041) | 0.047 (0.026, 0.087) | ||||||
| PARPi | count | 32 | 32 | 32 | 32 | |||||
| time | 26 (20, 43) | 26 (20, 43) | 26 (20, 43) | 26 (20, 43) | ||||||
| n | 13 (7, 29) | 23 (13, 47) | 18 (10, 39) | 12 (7, 20) | ||||||
| post_p | 0.35 (0.14, 0.48) | 0.41 (0.15, 0.46) | 0.4 (0.2, 0.49) | 0.38 (0.23, 0.49) | ||||||
| r_prob | 0.06 (0.06, 0.06) | 0.06 (0.06, 0.06) | 0.5 (0.5, 0.5) | 0.5 (0.5, 0.5) | ||||||
| rate | 0.026 (0.019, 0.044) | 0.027 (0.022, 0.037) | 0.024 (0.017, 0.03) | 0.028 (0.02, 0.048) |